What Do Storing Data in Files and Disks Involve Mechanical Anachronism Discussion

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You need to send me a question you prefer (i.e., you have good knowledge about it) related to the attached PDF. The basic requirements are: 1. your question and answer should not copy from any internet document or books/papers. 2. you need to make sure your answer to your question is correct. 3. the question should not be True or False question or simple acronyms. Review Storing Data: Disks and Files Lecture 5 (R&G Chapter 9) • Aren’t Databases Great? • Relational model • SQL “Yea, from the table of my memory I’ll wipe away all trivial fond records.” -- Shakespeare, Hamlet Disks, Memory, and Files The BIG picture… Query Optimization and Execution Disks and Files • DBMS stores information on disks. Relational Operators – In an electronic world, disks are a mechanical anachronism! Files and Access Methods • This has major implications for DBMS design! Buffer Management Disk Space Management – READ: transfer data from disk to main memory (RAM). – WRITE: transfer data from RAM to disk. – Both are high-cost operations, relative to in-memory operations, so must be planned carefully! DB Why Not Store Everything in Main Memory? • Costs too much. For ~$1000, PCConnection will sell you either – ~20GB of RAM – ~40GB of flash – ~5 TB of disk The Storage Hierarchy Smaller, Faster –Main memory (RAM) for currently used data. –Disk for the main database (secondary storage). –Tapes for archiving older versions of the data (tertiary storage). • Main memory is volatile. We want data to be saved between runs. (Obviously!) Bigger, Slower Source: Operating Systems Concepts 5th Edition 1 Thought Experiment: How Much RAM? Quick Review • Say your biz has – 100,000 customers – 10,000 products • Say space you need is – 10K/customer – 50K/product • How much space do you need? – 1G cust + .5G product = 1.5G – Double it for space utilization = 3G – Times 10 for growth = 30G – at, say, $100/G = – … nothing! (to a company with 100,000 customers) • 1 millisecond = 1ms = 1/1000 second • 1 microsecond = 1us = 1/1000 ms • 1 nanosecond = 1ns = 1/1000 us • Clock rate 3Ghz, how long is a cycle? Jim Gray’s Storage Latency Analogy: How Far Away is the Data? 10 9 Andromeda Tape /Optical Robot 10 6 Disk 100 Sacramento Memory • Secondary storage device of choice for ~40 years. • Main advantage over 2,000 Years Pluto – tapes: random access vs. sequential – RAM: persistence, easy growth 2 Years • Data is stored and retrieved in units called disk blocks or pages. • Unlike RAM, time to retrieve a disk block varies depending upon location on disk. 1.5 hr This Lecture Hall 10 min This Room My Head 1 min 10 On Board Cache 2 On Chip Cache 1ns Registers – Therefore, relative placement of blocks on disk has major impact on DBMS performance! Components of a Disk Accessing a Disk Page Spindle Disk head Tracks The platters spin (say, 120 rps). The arm assembly is moved in or out to position a head on a desired track. Tracks under heads make a cylinder (imaginary!). Only one head reads/writes at any one time. • Time to access (read/write) a disk block: Sector Arm movement Arm assembly Block size is a multiple of sector size (which is fixed).  Disks Platters – seek time ( moving arms to position disk head on track) – rotational delay ( waiting for block to rotate under head) – transfer time ( actually moving data to/from disk surface) • Seek time and rotational delay dominate. – Seek time varies between about 0.3 and 10msec – Rotational delay varies from 0 to 4msec – Transfer rate .01 - .05msec per 8K block • Key to lower I/O cost: reduce seek/rotation delays! Hardware vs. software solutions? 2 Arranging Pages on Disk Thought experiment • What is a good disk page size? • `Next’ block concept: – 8K? – 32K? – 1Meg? – blocks on same track, followed by – blocks on same cylinder, followed by – blocks on adjacent cylinder • Blocks in a file should be arranged sequentially on disk (by `next’), to minimize seek and rotational delay. • For a sequential scan, pre-fetching several pages at a time is a big win! • Why? Disk Space Management Context • Lowest layer of DBMS software manages space on disk (using OS file system or not?). • Higher levels call upon this layer to: Query Optimization and Execution Relational Operators – allocate/de-allocate a page – read/write a page Files and Access Methods • Best if a request for a sequence of pages is satisfied by pages stored sequentially on disk! Buffer Management Disk Space Management – Responsibility of disk space manager. – Higher levels don’t know how this is done, or how free space is managed. – Though they may make performance assumptions! DB • Hence disk space manager should do a decent job. Buffer Management in a DBMS When a Page is Requested ... Page Requests from Higher Levels • Buffer pool information table contains: BUFFER POOL • If requested page is not in pool: disk page – Choose a frame for replacement. Only “un-pinned” pages are candidates! – If frame is “dirty”, write it to disk – Read requested page into chosen frame free frame MAIN MEMORY DISK DB choice of frame dictated by replacement policy • Data must be in RAM for DBMS to operate on it! • Buffer Mgr hides the fact that not all data is in RAM • Pin the page and return its address. If requests can be predicted (e.g., sequential scans) pages can be pre-fetched several pages at a time!  3 More on Buffer Management • Requestor of page must eventually unpin it, and indicate whether page has been modified: – dirty bit is used for this. • Page in pool may be requested many times, – a pin count is used. – To pin a page, pin_count++ – A page is a candidate for replacement iff pin count == 0 (“unpinned”) • CC & recovery may entail additional I/O when a frame is chosen for replacement. – Write-Ahead Log protocol; more later! LRU Replacement Policy Buffer Replacement Policy • Frame is chosen for replacement by a replacement policy: – Least-recently-used (LRU), MRU, Clock, etc. • Policy can have big impact on # of I/O’s; depends on the access pattern. • For “Transactional” workloads, notion of a “working set” - pages that “should” be in memory. “Clock” Replacement Policy D(1) • Least Recently Used (LRU) – for each page in buffer pool, keep track of time when last unpinned – replace the frame which has the oldest (earliest) time – very common policy: intuitive and simple • Works well for repeated accesses to popular pages • Problems? • Problem: Sequential flooding – LRU + repeated sequential scans. – # buffer frames < # pages in file means each page request causes an I/O. – Idea: MRU better in this scenario? DBMS vs. OS File System OS does disk space & buffer mgmt: why not let OS manage these tasks? • Some limitations, e.g., files can’t span disks. • Buffer management in DBMS requires ability to: – pin a page in buffer pool, force a page to disk & order writes (important for implementing CC & recovery) – adjust replacement policy, and pre-fetch pages based on access patterns in typical DB operations. A(1) B(p) • An approximation of LRU C(1) • Arrange frames into a cycle, store one reference bit per frame – Can think of this as the 2nd chance bit • When pin count reduces to 0, turn on ref. bit • When replacement necessary do for each page in cycle { if (pincount == 0 && ref bit is on) turn off ref bit; else if (pincount == 0 && ref bit is off) choose this page for replacement; Questions: } until a page is chosen; How like LRU? Problems? Context Query Optimization and Execution Relational Operators Files and Access Methods Buffer Management Disk Space Management DB 4 Files of Records Unordered (Heap) Files • Blocks are the interface for I/O, but… • Higher levels of DBMS operate on records, and files of records. • FILE: A collection of pages, each containing a collection of records. Must support: – insert/delete/modify record – fetch a particular record (specified using record id) – scan all records (possibly with some conditions on the records to be retrieved) • Simplest file structure contains records in no particular order. • As file grows and shrinks, disk pages are allocated and de-allocated. • To support record level operations, we must: – keep track of the pages in a file – keep track of free space on pages – keep track of the records on a page • There are many alternatives for keeping track of this. – We’ll consider 2 Heap File Implemented as a List Heap File Using a Page Directory Data Page 1 Header Page Data Page Data Page Data Page Data Page 2 Full Pages Header Page Data Page Data Page Data Page Pages with Free Space • The header page id and Heap file name must be stored someplace. – Database “catalog” • Each page contains 2 `pointers’ plus data. Indexes (a sneak preview) • A Heap file allows us to retrieve records: – by specifying the rid, or – by scanning all records sequentially • Sometimes, we want to retrieve records by specifying the values in one or more fields, e.g., – Find all students in the “CS” department – Find all students with a gpa > 3 • Indexes are file structures that enable us to answer such value-based queries efficiently. Data Page N DIRECTORY • The entry for a page can include the number of free bytes on the page. • The directory is a collection of pages; linked list implementation is just one alternative. – Much smaller than linked list of all HF pages! Record Formats: Fixed Length F1 F2 F3 F4 L1 L2 L3 L4 Base address (B) Address = B+L1+L2 • Information about field types same for all records in a file; stored in system catalogs. • Finding i’th field done via arithmetic. 5 Record Formats: Variable Length Page Formats: Fixed Length Records • Two alternative formats (# fields is fixed): F1 F2 F3 $ Slot 1 Slot 2 F4 $ $ ... $ Slot N Fields Delimited by Special Symbols F1 F2 Slot 1 Slot 2 F3 Free Space Slot M F4 N PACKED Array of Field Offsets  Second offers direct access to i’th field, efficient storage of nulls (special don’t know value); small directory overhead. 1 . . . 0 1 1M number of records M ... 3 2 1 UNPACKED, BITMAP number of slots Record id = . In first alternative, moving records for free space management changes rid; may not be acceptable. Page Formats: Variable Length Records Rid = (i,N) ... Slot N System Catalogs • For each relation: Page i – – – – Rid = (i,2) Rid = (i,1) name, file location, file structure (e.g., Heap file) attribute name and type, for each attribute index name, for each index integrity constraints • For each index: 20 N ... 16 2 24 N 1 # slots SLOT DIRECTORY Pointer to start of free space Can move records on page without changing rid; so, attractive for fixed-length records too. Attr_Cat(attr_name, rel_name, type, position) attr_name attr_name rel_name type position sid name login age gpa fid fname sal rel_name Attribute_Cat Attribute_Cat Attribute_Cat Attribute_Cat Students Students Students Students Students Faculty Faculty Faculty – structure (e.g., B+ tree) and search key fields • For each view: – view name and definition • Plus statistics, authorization, buffer pool size, etc.  Catalogs are themselves stored as relations! pg_attribute type position string 1 string 2 string 3 integer 4 string 1 string 2 string 3 integer 4 real 5 string 1 string 2 real 3 6 Summary • Disks provide cheap, non-volatile storage. – Random access, but cost depends on location of page on disk; important to arrange data sequentially to minimize seek and rotation delays. • Buffer manager brings pages into RAM. – Page stays in RAM until released by requestor. – Written to disk when frame chosen for replacement (which is sometime after requestor releases the page). – Choice of frame to replace based on replacement policy. – Tries to pre-fetch several pages at a time. Summary (Contd.) • DBMS vs. OS File Support – DBMS needs features not found in many OS’s, e.g., forcing a page to disk, controlling the order of page writes to disk, files spanning disks, ability to control pre-fetching and page replacement policy based on predictable access patterns, etc. • Variable length record format with field offset directory offers support for direct access to i’th field and null values. • Slotted page format supports variable length records and allows records to move on page. Summary (Contd.) • File layer keeps track of pages in a file, and supports abstraction of a collection of records. – Pages with free space identified using linked list or directory structure (similar to how pages in file are kept track of). • Indexes support efficient retrieval of records based on the values in some fields. • Catalog relations store information about relations, indexes and views. (Information that is common to all records in a given collection.) 7
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Running head: WHAT DO STORING FILES AND DISKS INVOLVE

What do storing data in files and disks involve?
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WHAT DO STORING FILES AND DISKS INVOLVE
What do storing data in files and disks involve?
Storage of information involves storing data in databases. The database consists of the
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